Cinnamon Roll Protein Muffins
If you have a soft spot for anything cinnamon-spiced and crave a boost of wholesome goodness, you absolutely must try these Cinnamon Roll Protein Muffins. This delightful treat masterfully combines the nostalgic flavors of a cinnamon roll with the power-packed punch of protein, making it a perfect grab-and-go snack or a satisfying breakfast. Each bite offers a tender, moist muffin swirled with cinnamon sugar, and topped with a luscious, creamy finish that feels indulgent yet nourishing. Trust me, Cinnamon Roll Protein Muffins will soon become your new favorite way to start the day or recharge anytime you need a sweet pick-me-up.

Ingredients You’ll Need
These ingredients may look simple, but each one plays an essential role in creating that perfect balance of flavor, texture, and nutritional goodness in your Cinnamon Roll Protein Muffins.
- 2 large eggs: Provide structure and moisture to the muffins, binding everything together beautifully.
- 240 ml plain Greek yogurt (nonfat or low-fat): Adds creaminess and a subtle tang that keeps the muffins tender.
- 80 ml unsweetened almond milk: Offers a dairy-free liquid base with a mild nutty flavor.
- 60 ml unsweetened applesauce: A natural sweetener that also adds moisture without extra fat.
- 60 ml maple syrup or honey: Brings a touch of natural sweetness and depth of flavor.
- 2 teaspoons vanilla extract: Enhances all the other flavors with its warm, fragrant notes.
- 100 grams oat flour (or finely ground oats): Adds a hearty texture and wholesome fiber.
- 60 grams vanilla protein powder (whey or plant-based): Boosts protein content to keep you fuller longer.
- 35 grams coconut flour: Contributes a subtle tropical flavor and light texture.
- 1 1/2 teaspoons baking powder: Helps the muffins rise to a perfect fluffiness.
- 1/2 teaspoon baking soda: Works with the baking powder for optimal lift and tenderness.
- 1/4 teaspoon salt: Balances sweetness and enhances all flavors.
- 2 tablespoons coconut sugar or brown sugar: Sweetens the cinnamon swirl for that classic cinnamon roll allure.
- 1 1/2 teaspoons ground cinnamon: The star spice that gives these muffins their unforgettable warm, spicy kick.
- 60 grams low-fat cream cheese, softened: For a dreamy, creamy topping if you want to elevate your muffin experience.
- 30 grams Greek yogurt: To lighten the cream cheese mixture while adding tanginess.
- 15 ml maple syrup: Sweetens and smooths the topping without overpowering it.
How to Make Cinnamon Roll Protein Muffins
Step 1: Prepare Oven and Muffin Tin
Preheat your oven to 175°C, which ensures the muffins bake evenly and rise beautifully. Line a 12-cup muffin tin with paper liners or lightly grease each cup to prevent sticking and make removal a breeze once baked.
Step 2: Mix Wet Ingredients
In a large mixing bowl, whisk together the eggs, Greek yogurt, almond milk, applesauce, maple syrup, and vanilla extract. This combination creates a smooth, flavorful base that moistens the muffins and ties the flavors together seamlessly.
Step 3: Combine Dry Ingredients
In a separate bowl, mix the oat flour, vanilla protein powder, coconut flour, baking powder, baking soda, and salt until evenly combined. This dry mixture contributes to the muffins’ tender crumb and subtle texture, while the protein powder adds that necessary boost.
Step 4: Incorporate Wet and Dry Mixtures
Gradually fold the dry ingredients into the wet mixture, stirring gently to just combine. Overmixing can make your muffins dense, so a light hand here helps keep them tender and fluffy—just what you want from your Cinnamon Roll Protein Muffins.
Step 5: Prepare Cinnamon Swirl
Stir together the coconut sugar and ground cinnamon in a small bowl to create the irresistible cinnamon swirl that mimics the classic cinnamon roll experience within these muffins.
Step 6: Layer Muffin Batter and Swirl
Fill each muffin cup halfway with batter, then sprinkle a generous pinch of the cinnamon-sugar mixture on top. Add the remaining batter to fill the cups, then gently swirl the cinnamon sugar through with a toothpick or skewer to create a beautiful marbled effect.
Step 7: Bake Muffins
Bake your muffins for 18 to 22 minutes or until a toothpick inserted into the center comes out clean. After baking, let them cool in the tin for a few minutes before transferring to a wire rack—this helps maintain their moist texture without becoming soggy.
Step 8: Optional Cream Cheese Topping
If you want to take these muffins up a notch, whip together softened cream cheese, Greek yogurt, and maple syrup until smooth and drizzle it over the cooled muffins. This luscious topping adds a tangy sweetness that perfectly complements the cinnamon notes.
How to Serve Cinnamon Roll Protein Muffins

Garnishes
Sprinkling a little extra cinnamon or a dusting of powdered sugar over the top adds visual appeal and a hint more sweetness. For a fresh twist, chopped nuts like pecans or walnuts can add a lovely crunch that pairs wonderfully with the tender muffin.
Side Dishes
These muffins pair beautifully with a warm cup of coffee or your favorite herbal tea for a comforting, balanced snack. For a heartier breakfast, serve alongside fresh fruit or a creamy yogurt bowl to keep the meal light yet satisfying.
Creative Ways to Present
Try slicing the muffins in half and spreading a bit of almond butter or peanut butter inside for an extra protein punch and richness. Alternatively, serve them warm with a dab of butter melting on top for a simple but indulgent treat that’s bound to delight.
Make Ahead and Storage
Storing Leftovers
Keep your Cinnamon Roll Protein Muffins fresh by storing them in an airtight container at room temperature for up to 3 days. This is perfect if you plan to enjoy them within a few days without losing any of their delightful softness and flavor.
Freezing
For longer storage, wrap each muffin individually in plastic wrap or foil and place them in a freezer-safe bag. They can be frozen for up to 3 months, making it easy to always have a nutritious and delicious snack on hand.
Reheating
When you’re ready to enjoy frozen Cinnamon Roll Protein Muffins, simply thaw at room temperature or warm them in the microwave for about 20-30 seconds. Warming brings back their fresh-from-the-oven softness and intensifies those lovely cinnamon aromas.
FAQs
Can I use a different type of protein powder?
Absolutely! Whether you prefer whey, plant-based, or collagen protein powders, any can work well here. Just keep the flavor in mind—vanilla protein powder is recommended for that subtle sweetness that complements the cinnamon.
Are these muffins gluten-free?
They can be, provided you use certified gluten-free oat flour and protein powder. Always double-check your ingredient labels to ensure no hidden gluten if that’s a concern for you.
Can I substitute the sweeteners?
Yes! The recipe is quite flexible—maple syrup, honey, and coconut sugar can be swapped for alternatives like agave nectar or brown sugar, but these swaps might slightly affect the flavor and texture.
How do I make these muffins fully vegan?
To veganize, replace eggs with flax or chia egg substitutes, opt for plant-based Greek-style yogurt, and use a vegan protein powder. The almonds milk already fits this criterion, so you’re halfway there!
Can these be made into protein bars?
In theory, yes! By pressing the batter into a lined baking dish and adjusting cooking times, you could bake a protein bar version. Just keep a close eye while baking to avoid dryness.
Final Thoughts
These Cinnamon Roll Protein Muffins combine the joy of a sweet cinnamon roll with the benefits of a protein-packed snack that’s perfect for busy mornings or anytime you crave something comforting and nutritious. I wholeheartedly recommend giving this recipe a try because it brings together all the warmth and flavor we love from cinnamon rolls, yet it’s wholesome enough to fuel your day. Once you taste them, you’ll understand why Cinnamon Roll Protein Muffins might just become your new favorite treat!
PrintCinnamon Roll Protein Muffins
These Cinnamon Roll Protein Muffins combine the comforting flavors of a classic cinnamon roll with a protein-packed twist, making them an ideal nutritious breakfast or snack option. Soft, moist, and lightly sweetened with maple syrup, these muffins feature a delightful cinnamon swirl and an optional creamy topping for added indulgence without the guilt.
- Prep Time: 15 minutes
- Cook Time: 20 minutes
- Total Time: 35 minutes
- Yield: 12 muffins 1x
- Category: Breakfast, Snack
- Method: Baking
- Cuisine: American
- Diet: Low Fat
Ingredients
Wet Ingredients
- 2 large eggs
- 240 ml plain Greek yogurt (nonfat or low-fat)
- 80 ml unsweetened almond milk
- 60 ml unsweetened applesauce
- 60 ml maple syrup or honey
- 2 teaspoons vanilla extract
Dry Ingredients
- 100 grams oat flour (or finely ground oats)
- 60 grams vanilla protein powder (whey or plant-based)
- 35 grams coconut flour
- 1 1/2 teaspoons baking powder
- 1/2 teaspoon baking soda
- 1/4 teaspoon salt
Cinnamon Swirl
- 2 tablespoons coconut sugar or brown sugar
- 1 1/2 teaspoons ground cinnamon
Cream Cheese Topping (Optional)
- 60 grams low-fat cream cheese, softened
- 30 grams Greek yogurt
- 15 ml maple syrup
Instructions
- Prepare Oven and Muffin Tin: Preheat the oven to 175°C (350°F). Line a 12-cup muffin tin with paper liners or lightly grease the wells to prevent sticking.
- Mix Wet Ingredients: In a large mixing bowl, whisk together the eggs, Greek yogurt, almond milk, unsweetened applesauce, maple syrup, and vanilla extract until smooth and well combined.
- Combine Dry Ingredients: In a separate bowl, mix the oat flour, vanilla protein powder, coconut flour, baking powder, baking soda, and salt until evenly incorporated.
- Incorporate Wet and Dry Mixtures: Gradually fold the dry ingredients into the wet ingredients, stirring gently until just combined. Do not overmix to keep the muffins tender.
- Prepare Cinnamon Swirl: In a small bowl, combine the coconut sugar and ground cinnamon to create the cinnamon-sugar mixture for the swirl.
- Layer Muffin Batter and Swirl: Spoon batter to fill each muffin cup halfway. Sprinkle a portion of the cinnamon-sugar mixture over the batter, then add the remaining batter on top. Swirl gently with a toothpick or skewer to create a marbled cinnamon effect.
- Bake Muffins: Bake in the preheated oven for 18 to 22 minutes, or until a toothpick inserted into the center comes out clean. Let the muffins cool in the tin for a few minutes before transferring them to a wire rack to cool completely.
- Optional Cream Cheese Topping: For an extra creamy topping, blend the softened cream cheese, Greek yogurt, and maple syrup until smooth. Drizzle over cooled muffins before serving if desired.
Notes
- Use plain Greek yogurt for best results; nonfat or low-fat options reduce fat content.
- Oat flour can be made by finely grinding rolled oats in a blender or food processor.
- Choose your preferred protein powder: whey or plant-based both work well.
- Do not overmix batter to ensure muffins stay moist and tender.
- Muffins can be stored in an airtight container in the refrigerator for up to 5 days.
- Freeze leftovers individually wrapped for up to 3 months; thaw before eating.
- Adjust sweetness by varying the amount of maple syrup or honey according to taste.
Nutrition
- Serving Size: 1 muffin
- Calories: 160 kcal
- Sugar: 6 g
- Sodium: 150 mg
- Fat: 3 g
- Saturated Fat: 1.5 g
- Unsaturated Fat: 1 g
- Trans Fat: 0 g
- Carbohydrates: 20 g
- Fiber: 3 g
- Protein: 12 g
- Cholesterol: 40 mg
Keywords: cinnamon roll muffins, protein muffins, healthy muffins, breakfast muffins, low fat protein muffin, Greek yogurt muffins, cinnamon swirl, easy baked snack